Return to main results Retrieve Phyre Job Id

Job DescriptionP64588
Confidence97.55%DateThu Jan 5 12:09:41 GMT 2012
Rank59Aligned Residues73
% Identity15%Templated3ctaa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.... .....80.........90.........100.........110.........120.........130.........140
Predicted Secondary structure 

....


















Query SS confidence 









. . . .

































































Query Sequence  LVILDILSRD. . . . DSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENRE
Query Conservation 



 

   ....
 




 
 

    
    
 




 
  

  


        

 
 

  

  
    
Alig confidence 









....










........























.





















Template Conservation 
  
  
        

  


  
........     
 
  
  

  


 
  .
 
   
 

  
   
     
Template Sequence  IKKIKEAAEASNRAYLTSSKLADML. . . . . . . . GISQQSASRIIIDLEKNGYITRTV. TKRGQILNITEKGLDVLYTEFA
Template Known Secondary structure  TTTSS

........TS
TTS.TT
Template Predicted Secondary structure 







........





.





Template SS confidence 















































































   11........20.........30..... ....40.........50......... 60.........70.........80.
 
   141.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  QVEMIE
Query Conservation      
 
Alig confidence 





Template Conservation       
Template Sequence  DLSRIL
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 





   82.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions