 |
Job Description | P64588 | Confidence | 93.25% | Date | Thu Jan 5 12:09:41 GMT 2012 |
Rank | 125 | Aligned Residues | 58 |
% Identity | 19% | Template | d2v7fa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Rps19E-like
|
Resolution | 1.15 |
|
 |
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | G | N | Y | T | P | S | P | G | V | I | Y | P | T | L | D | F | L | Q | E | Q | S | L | I | T | I | R | E | E | E | G | G | K | K | Q | I | A | L | T | E | Q | G | A | Q | W | L | E | E | N | R | E | Q | V | E | M | I | E | E | R | I | K | A |
Query Conservation |   |
  |
|   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|
|
|   |
|
|
|   |   |
|
|
|
|
|   |   |
|   |
|
|
|   |   |   |   |
| . | . | . | . |
|   |
|
|   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |
|   |   |   |   |   |   |
|
Template Sequence |   |
E | R | F | Y | K | A | G | G | S | I | I | R | K | A | L | Q | Q | L | E | A | A | G | F | V | E | K | V | P | G | K | G | . |
. |
. |
. |
R | V | I | T | P | K | G | R | S | F | L | D | K | I | A | T | E | L | K | K | E | L | E | E | I | I | P |
Template Known Secondary structure |   |
T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | T | T | T |  | . | . | . | . |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
| . | . | . | . |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
|
|
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|