Job Description P64588 Confidence 98.09% Date Thu Jan 5 12:09:41 GMT 2012 Rank 25 Aligned Residues 137 % Identity 20% Template d2p4wa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PF1790-like Resolution 2.60

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.											.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.											.	.	.	.	.	.	.	.
Query Sequence		E	L	R	L	V	I	L	D	I	L	S	R	D	D	S	H	G	Y	E	L	I	K	A	I	E	N	L	T	Q	G	N	Y	T	P	S	P	G	V	I	Y	P	T	L	D	F	L	Q	E	Q	S	L	I	T	I	R	E	E	E	.	.	.	.	G	G	K	K	Q	I	A	L	T	E	.	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.											.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.																											.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.
Template Sequence		E	T	R	R	R	I	L	F	L	L	T	K	R	P	Y	F	V	S	E	L	S	R	E	L	.	.	.	.	.	.	.	.	G	V	G	Q	K	A	V	L	E	H	L	R	I	L	E	E	A	G	L	I	E	S	R	V	E	K	I	P	R	G	R	P	R	K	Y	Y	M	I	K	K	G	L	R	L	E	I	L	L
Template Known Secondary structure														S												.	.	.	.	.	.	.	.	T																T	T	S								B	T	T	B										T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
																							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	A	Q	W	L	E	E	N	R	E	Q	V	E	M	I	E	E	R	I	K	A	R	C	V	G	A	A	L	R	Q	N	P	Q	M	K	R	A	L	D	N	F	K	A	V	L	D	L	R	V	N	Q	S	D	I	S	D	A	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	T	L	F	G	S	E	M	Y	E	A	K	G	V	R	K	S	P	E	Y	E	Q	A	K	E	L	I	K	S	Q	E	P	I	N	V	K	M	R	E	L	A	E	F	L	H	E	L	N	E	R	I	R	E	I	I	E	E	K	R	E	L	E	E	A	R	I	L	I	E	T	Y	I	E	N	T	M	R	R	L
Template Known Secondary structure			T	T									T	T	S	S														S	S		S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	K	I	I	A	V	I	D	R	A	A	F	D	I	T	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	E	N	R	Q	I	I	E	E	I	F	R	D	I	E	K	I
Template Known Secondary structure																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions