Job Description P64588 Confidence 96.63% Date Thu Jan 5 12:09:41 GMT 2012 Rank 102 Aligned Residues 110 % Identity 12% Template d2g9wa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 1.80

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		61	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		G	E	L	R	L	V	I	L	D	I	L	.	.	S	R	D	D	S	H	G	Y	E	L	I	K	A	I	E	N	L	T	Q	G	N	Y	T	P	S	P	G	V	I	Y	P	T	L	D	F	L	Q	E	Q	S	L	I	T	I	R	E	E	E	G	G	K	K	Q	I	A	L	T	E	Q	G	A	Q	W	L	E	E	N
Query Conservation													.	.
Alig confidence													.	.																			.	.	.	.																					.	.	.	.
Template Conservation																																	.	.	.	.																					.	.	.	.
Template Sequence		G	D	L	E	R	A	V	X	D	H	L	W	S	R	T	E	P	Q	T	V	R	Q	V	H	E	A	L	S	A	R	R	.	.	.	.	D	L	A	Y	T	T	V	X	A	V	L	Q	R	L	A	K	K	N	L	V	.	.	.	.	L	Q	I	R	A	H	R	Y	A	P	V	H	G	R	D	E	L	V	A	G	L
Template Known Secondary structure														T		S	S												T	T	T		.	.	.	.																	T	T	S		.	.	.	.											S	S
Template Predicted Secondary structure																																	.	.	.	.																					.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	Q	V	E	M	I	E	E	R	I	K	A	R	C	V	G	A	A	L	R	Q	N	P	Q	M	K	R	A	L	D	N	F	K	A	V	L	D	L	R	V	N	Q	S	D	I	S	D	A	Q	I	K	K	I	I	A	V	I	D	R	A
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		X	V	D	.	.	.	.	.	.	.	.	.	.	.	.	A	L	A	Q	A	E	D	S	G	S	R	Q	A	A	L	V	H	F	V	E	.	.	.	.	.	.	.	.	.	R	V	G	A	D	E	A	D	A	L	R	R	A	L	A	E	L
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.			T	T	S	S	S														.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.													.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.										.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions