Return to main results Retrieve Phyre Job Id

Job DescriptionP64588
Confidence97.64%DateThu Jan 5 12:09:41 GMT 2012
Rank51Aligned Residues100
% Identity19%Templated2fbia1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90.........100.........110.........120. ........130.........140..
Predicted Secondary structure 


















..

Query SS confidence 
























































. .




















Query Sequence  LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG. . KKQIALTEQGAQWLEENREQV
Query Conservation 



 

   
 




 
 

    
    
 




 
  

  


        ..

 
 

  

  
    
  
Alig confidence 




















........



























..




















Template Conservation   

  
      
  


   ........      

  
  
   


 
     
 
   
 

  
           
Template Sequence  RVIRILRQQGEMESYQLANQA. . . . . . . . CILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFVSMSGDM
Template Known Secondary structure 
ST........T

TTSTT
Template Predicted Secondary structure 




........












Template SS confidence 















































































   38.40.........50........ .60.........70.........80.........90.........100.........
 
   143......150.........160.........170..
Predicted Secondary structure 





Query SS confidence 





























Query Sequence  EMIEERIKARCVGAALRQNPQMKRALDNFK
Query Conservation    
  

              
  

  

Alig confidence 





























Template Conservation            
   
   
   
  
  
 
Template Sequence  EKNYQRIQERFGEEKLAQLLELLNELKKIK
Template Known Secondary structure 
TT
Template Predicted Secondary structure 





Template SS confidence 





























   110.........120.........130.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions