Return to main results Retrieve Phyre Job Id

Job DescriptionP64588
Confidence45.79%DateThu Jan 5 12:09:41 GMT 2012
Rank216Aligned Residues43
% Identity16%Templated1ylfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90.........100.........110.....
Predicted Secondary structure 














Query SS confidence 


















































Query Sequence  LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI
Query Conservation 



 

   
 




 
 

    
    
 




 
  

  


  
Alig confidence 




















........





















Template Conservation 
  

       

  

   ........ 
    
 


  
   


 
Template Sequence  LSILKNNPSSLCTSDYXAESV. . . . . . . . NTNPVVIRKIXSYLKQAGFVYV
Template Known Secondary structure  S
GGG

........TS
TTS
Template Predicted Secondary structure 







........





Template SS confidence 


















































   17..20.........30....... ..40.........50.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions