Job Description P64588 Confidence 97.54% Date Thu Jan 5 12:09:41 GMT 2012 Rank 62 Aligned Residues 115 % Identity 18% Template d1ulya_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Hypothetical protein PH1932 Resolution 2.50

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.
Query SS confidence																																																														.	.	.	.
Query Sequence		E	L	R	L	V	I	L	D	I	L	S	R	D	D	S	H	G	Y	E	L	I	K	A	I	E	N	L	T	Q	G	N	Y	T	P	S	P	G	V	I	Y	P	T	L	D	F	L	Q	E	Q	S	L	I	T	I	R	E	E	E	G	G	.	.	.	.	K	K	Q	I	A	L	T	E	Q	G	A	Q	W	L	E	E
Query Conservation																																																														.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.																													.	.	.	.											.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Template Sequence		D	T	R	R	K	I	L	K	L	L	R	N	K	E	X	T	I	S	Q	L	S	E	I	L	.	.	.	.	.	.	.	.	G	K	T	P	Q	T	I	Y	H	H	I	E	K	L	K	E	A	G	L	V	E	V	K	R	T	E	X	K	G	N	L	V	E	K	Y	Y	G	R	T	A	D	V	.	.	.	.	.	.
Template Known Secondary structure												T	T			B										.	.	.	.	.	.	.	.	T																T	T	S										T	T									S	S	S		.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.									.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	E	Q	V	E	M	I	E	E	R	I	K	A	R	C	V	G	A	A	L	R	Q	N	P	Q	M	K	R	A	L	D	N	F	K	A	V	L	D	L	R	V	N	Q	S	D	I	S	D	A	Q	I	K	K	I	I	A	V	I	D	R	A	A	F	D	I	T	Q	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	I	N	L	Y	L	G	D	E	E	L	R	Y	I	A	R	S	R	L	K	T	K	I	D	I	F	K	R	L	G	Y	Q	F	E	E	N	E	L	L	N	I	X	D	R	X	S	Q	K	E	F	D	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S		S	S																						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions