 |
Job Description | P64588 | Confidence | 88.04% | Date | Thu Jan 5 12:09:41 GMT 2012 |
Rank | 138 | Aligned Residues | 63 |
% Identity | 17% | Template | d1fp2a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Plant O-methyltransferase, N-terminal domain
|
Resolution | 1.40 |
|
 |
  |   |
63 | . | . | . | . | . | . | 70 | . | |
|
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | L | V | I | L | D | I | L | . |
. |
S | R | D | D | S | H | G | Y | E | L | I | K | A | I | E | N | L | T | Q | G | N | Y | T | P | S | P | G | V | I | Y | P | T | L | D | F | L | Q | E | Q | S | L | I | T | I | R | E | E | E | G | G | K | K | Q | I | A | L | T | E | Q | G | A |
Query Conservation |   |
|
|
|
|
|
|   |
|
| . | . |   |   |   |
|   |
|
|
|
|
|   |
|   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|
|
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   | . | . |
|   |
|
|   |   |
|   |
Template Sequence |   |
V | E | M | N | I | P | N | I | I | Q | N | H | G | K | P | I | S | L | S | N | L | V | S | I | L | . |
. |
. |
. |
. |
Q | V | P | S | S | K | I | G | N | V | R | R | L | M | R | Y | L | A | H | N | G | F | F | E | I | I | T | K | E | E | E | S | . |
. |
Y | A | L | T | V | A | S | E |
Template Known Secondary structure |   |
 |  | T | T |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | T |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  | S | S | S |  |  | . | . |  |  |  |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
| . | . |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | |
|
. | . | . | . | . | . | 100 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|