 |
| Job Description | P64588 | | Confidence | 72.47% | Date | Thu Jan 5 12:09:41 GMT 2012 |
| Rank | 167 | Aligned Residues | 67 |
| % Identity | 21% | Template | d1fp1d1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Plant O-methyltransferase, N-terminal domain
|
| Resolution | 1.82 |
|
| | |
63 | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
. | . | . | . | . | . | . | . | 130 | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | |
| . | . | . | . | . |
|
|
|
| | | | | | | | | | | | |
|
|
|  |  |
|
| . |
|
| | | | | | | | | | | |
|
|
| | | | | |
|
|
|
| . | . | . | . |
| | | | | |
| | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
L | R | L | V | I | L | D | I | L | S | R | . |
. |
. |
. |
. |
D | D | S | H | G | Y | E | L | I | K | A | I | E | N | L | T | Q | G | N | Y | T | P | S | . |
P | G | V | I | Y | P | T | L | D | F | L | Q | E | Q | S | L | I | T | I | R | E | E | E | G | G | . |
. |
. |
. |
K | K | Q | I | A | L | T | E | Q | G | A |
| Query Conservation | |
|
|
|
|
|
| |
|
| | | . | . | . | . | . | |
| |
|
|
|
|
| |
| |
|
| | | | |
| | | | |
| . | |
|
|
|
|
| |
| | |
|
| | |
|
|
| | | | | | | | | . | . | . | . |
|
| |
| |
|
| | |
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
|
| |
| |
| | | | | | |
|
| | |
| | |
|
|
| | |
| | | | | | . | . | . | | | | | | | |
| |
|
|
|
| |
|
| | |
|
|
| | | | | | | | |
|
| | | | | |
| |
|
|
|
|
|
|
| Template Sequence | |
I | D | L | N | L | F | E | I | I | A | K | A | T | P | P | G | A | F | M | S | P | S | E | I | A | S | K | L | P | A | S | T | Q | . |
. |
. |
H | S | D | L | P | N | R | L | D | R | M | L | R | L | L | A | S | Y | S | V | L | T | S | T | T | R | T | I | E | D | G | G | A | E | R | V | Y | G | L | S | M | V | G | K |
| Template Known Secondary structure | |
| | T | T | | | | | | | T |
| S | S | T | T |
|
| B |
| | | | | | T | T | S |
| G | G | G |
| . | . | . |
| T | T | | | | | | | | | | | | | | | T | T | S | | | | | | | |
| T | T | S |
| | | | | | | |
| T | T | G | G |
| Template Predicted Secondary structure | |
| |
|
| | | | | | | |
|
|
|
|
|
|
|
|
| | | | | | | |
|
|
|
|
|
| . | . | . |
|
|
|
| | | | | | | | | | | | | |
|
|
| | | | |
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
