Job Description P64588 Confidence 97.49% Date Thu Jan 5 12:09:41 GMT 2012 Rank 69 Aligned Residues 108 % Identity 18% Template c3oopA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2960 protein; PDBTitle: the structure of a protein with unknown function from listeria innocua2 clip11262 Resolution 1.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		R	F	F	G	H	G	E	L	R	L	V	I	L	D	I	L	S	R	D	D	.	S	H	G	Y	E	L	I	K	A	I	E	N	L	T	Q	G	N	Y	T	P	S	P	G	V	I	Y	P	T	L	D	F	L	Q	E	Q	S	L	I	T	I	R	E	E	E	G	G	K	K	Q	I	A	L	T	E	Q	G	A	Q	W
Query Conservation																						.
Alig confidence																						.											.	.	.	.	.	.	.	.																								.	.
Template Conservation																																	.	.	.	.	.	.	.	.																								.	.
Template Sequence		A	S	Y	D	V	T	P	E	Q	W	S	V	L	E	G	I	E	A	N	E	P	I	S	Q	K	E	I	A	L	W	T	.	.	.	.	.	.	.	.	K	K	D	T	P	T	V	N	R	I	V	D	V	L	L	R	K	E	L	I	V	R	E	.	.	I	R	R	I	S	L	L	S	L	T	D	K	G	R	K	E
Template Known Secondary structure		T	T	S	S	S															S	S											.	.	.	.	.	.	.	.	T																T	T	S					.	.				S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	N	R	E	Q	V	E	M	I	E	E	R	I	K	A	R	C	V	G	A	A	L	R	Q	N	P	Q	M	K	R	A	L	D	N	F	K	A	V	L	D	L	R	V	N	Q	S	D	I	S	D	A	Q	I	K	K	I	I	A	V	I	D	R	A	A	F	D	I	T
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	T	E	L	R	D	I	V	E	A	S	C	E	K	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	G	V	T	R	T	D	L	E	Q	F	T	A	I	L	K	N	I	S	T	N	I	E
Template Known Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.																																.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions