Job Description P64588 Confidence 91.05% Date Thu Jan 5 12:09:41 GMT 2012 Rank 133 Aligned Residues 55 % Identity 15% Template c2xroE_ PDB info PDB header:dna-binding protein/dna Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator Resolution 3.40 Å

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		65	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		L	V	I	L	D	I	L	S	.	.	R	D	D	S	H	G	Y	E	L	I	K	A	I	E	N	L	T	Q	G	N	Y	T	P	S	P	G	V	I	Y	P	T	L	D	F	L	Q	E	Q	S	L	I	T	I	R	E	E	E	G	G	K	K	Q	I	A	L	T	E	Q
Query Conservation										.	.
Alig confidence										.	.														.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																									.	.	.	.	.	.	.	.																							.	.	.
Template Sequence		A	S	I	M	R	A	L	G	S	H	P	H	G	L	S	L	A	A	I	A	Q	L	V	.	.	.	.	.	.	.	.	G	L	P	R	S	T	V	Q	R	I	I	N	A	L	E	E	E	F	L	V	E	A	.	.	.	L	G	P	A	G	G	F	R	L	G	P	A
Template Known Secondary structure												T	T		B									S	.	.	.	.	.	.	.	.	S															T	T	T	S				.	.	.		S	S	S	S						T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																							.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.									.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions