Job Description P64588 Confidence 97.63% Date Thu Jan 5 12:09:41 GMT 2012 Rank 55 Aligned Residues 76 % Identity 21% Template c2kkoB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:possible transcriptional regulatory protein PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e. Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	E	L	R	L	V	I	L	D	I	L	S	R	D	D	S	H	G	Y	E	L	I	K	A	I	E	N	L	T	Q	G	N	Y	T	P	S	P	G	V	I	Y	P	T	L	D	F	L	Q	E	Q	S	L	I	T	I	R	E	E	E	G	G	K	K	Q	I	A	L	T	E	Q	G	A	Q	W	L	E	E	N	R
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.																									.
Template Conservation																												.	.	.	.	.	.	.	.																									.
Template Sequence		A	N	G	R	R	L	Q	I	L	D	L	L	A	Q	G	E	R	A	V	E	A	I	A	T	A	T	.	.	.	.	.	.	.	.	G	M	N	L	T	T	A	S	A	N	L	Q	A	L	K	S	G	G	L	V	E	A	R	R	.	E	G	T	R	Q	Y	Y	R	I	A	G	E	D	V	A	R	L	F	A	L	V
Template Known Secondary structure		T												T	T													.	.	.	.	.	.	.	.	T																	T	S						.		T	T							S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.																									.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.									.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	V	E	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	V	A	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions