Job Description P64588 Confidence 71.34% Date Thu Jan 5 12:09:41 GMT 2012 Rank 172 Aligned Residues 111 % Identity 20% Template c2k27A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8; PDBTitle: solution structure of human pax8 paired box domain Resolution UNK

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	G	G	R	R	Q	R	F	F	G	H	G	E	L	R	L	V	I	L	D	I	L	S	R	D	D	S	H	G	Y	E	L	I	K	A	I	E	N	L	T	Q	G	N	Y	T	P	S	P	G	V	I	Y	P	T	L	D	F	L	Q	E	Q	S	L	I	T	I	R	E	E	E	G	G	K	K	Q	I	A	L	T
Query Conservation
Alig confidence														.										.															.	.	.	.	.	.	.	.																									.
Template Conservation														.										.															.	.	.	.	.	.	.	.																									.
Template Sequence		G	G	A	F	V	N	G	R	P	L	P	E	.	V	V	R	Q	R	I	V	D	L	.	A	H	Q	G	V	R	P	C	D	I	S	R	Q	L	.	.	.	.	.	.	.	.	R	V	S	H	G	C	V	S	K	I	L	G	R	Y	Y	E	T	G	S	I	R	P	G	V	.	I	G	G	S	K	P	K	V	A	T
Template Known Secondary structure				T	T	S	S	S		S	S			.										.				T											.	.	.	.	.	.	.	.	T			S										S	S	T	T	S							.
Template Predicted Secondary structure														.										.															.	.	.	.	.	.	.	.																									.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure															.	.	.	.	.														.	.
Query SS confidence															.	.	.	.	.														.	.
Query Sequence		E	Q	G	A	Q	W	L	E	E	N	R	E	Q	.	.	.	.	.	V	E	M	I	E	E	R	I	K	A	R	C	V	.	.	G	A	A	L	R	Q	N	P	Q	M	K	R	A	L	D	N
Query Conservation															.	.	.	.	.														.	.
Alig confidence															.	.	.	.	.														.	.
Template Conservation
Template Sequence		P	K	V	V	E	K	I	G	D	Y	K	R	Q	N	P	T	M	F	A	W	E	I	R	D	R	L	L	A	E	G	V	C	D	N	D	T	V	P	S	V	S	S	I	N	R	I	I	R	T
Template Known Secondary structure		T	T													S	S	S													T		S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions