Job Description P64588 Confidence 97.34% Date Thu Jan 5 12:09:41 GMT 2012 Rank 83 Aligned Residues 110 % Identity 16% Template c2it0A_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii Resolution 2.60 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	V	I	L	D	I	L	S	R	D	D	S	H	G	Y	E	L	I	K	A	I	E	N	L	T	Q	G	N	Y	T	P	S	P	G	V	I	Y	P	T	L	D	F	L	Q	E	Q	S	L	I	T	I	R	E	E	E	G	G	K	K	Q	I	A	L	T	E	Q	G	A	Q	W	L	E	E	N	R	E	Q	V
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.																							.	.	.	.
Template Sequence		L	R	T	I	Y	D	L	E	E	E	G	V	T	P	L	R	A	R	I	A	E	R	L	.	.	.	.	.	.	.	.	D	Q	S	G	P	T	V	S	Q	T	V	S	R	M	E	R	D	G	L	L	R	V	.	.	.	.	A	G	D	R	H	L	E	L	T	E	K	G	R	A	L	A	I	A	V	M	R	K	H
Template Known Secondary structure											T	T												T	.	.	.	.	.	.	.	.	T																T	T	S				.	.	.	.		T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.									.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	I	E	E	R	I	K	A	R	C	V	G	A	A	L	R	Q	N	P	Q	M	K	R	A	L	D	N	F	K	A	V	L	D	L	R	V	N	Q	S	D	I	S	D	A	Q	I	K	K	I	I	A	V	I	D
Query Conservation
Alig confidence		.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	R	L	A	E	R	L	L	V	D	V	I	G	L	P	W	E	E	V	H	A	E	A	C	R	W	E	H	V	.	.	.	.	.	.	.	.	.	.	.	.	M	S	E	D	V	E	R	R	L	V	K	V	L	N
Template Known Secondary structure		.										T	T															T	T	T	.	.	.	.	.	.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure		.																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.													.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions