Job Description P64588 Confidence 22.33% Date Thu Jan 5 12:09:41 GMT 2012 Rank 275 Aligned Residues 101 % Identity 13% Template c2gajA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase i; PDBTitle: structure of full length topoisomerase i from thermotoga maritima in2 monoclinic crystal form Resolution 1.95 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	I	K	A	I	E	N	L	T	Q	G	N	Y	T	P	S	P	G	V	I	Y	P	T	L	D	F	L	Q	E	Q	S	L	I	T	I	R	E	E	E	G	G	K	K	Q	I	A	L	T	E	Q	G	A	Q	W	L	E	E	N	R	E	Q	V	E	M	I	E	E	R	I	K	A	R	C	V	G	A	A	L	R
Query Conservation
Alig confidence															.	.	.	.																					.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.																					.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	V	K	E	M	E	R	L	G	I	G	R	.	.	.	.	P	S	T	Y	A	S	T	I	K	L	L	L	N	R	G	Y	I	K	K	I	.	.	.	.	.	R	G	Y	L	Y	P	T	I	V	G	S	V	V	M	D	Y	L	E	K	K	Y	S	D	V	V	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T		S		.	.	.	.	T	T	T											T	T	S					.	.	.	.	.	T	T					B														S	T	T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.																					.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460	.					.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.						.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	P	Q	M	K	R	A	L	D	N	F	K	A	V	L	D	L	R	V	N	Q	S	D	I	S	D	A	Q	I	K	K	I	I	A	V	I	D	R	A	A	F	D	I	T	Q	L
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	V	S	F	T	A	E	M	E	K	D	L	D	E	V	E	Q	G	K	K	T	D	K	I	V	L	R	E	F	Y	E	S	F	S	S	V	F	D	R	N	D	R	I
Template Known Secondary structure		.	.	.	.	.																T	T	S	S																			T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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