Return to main results Retrieve Phyre Job Id

Job DescriptionP64588
Confidence24.69%DateThu Jan 5 12:09:41 GMT 2012
Rank265Aligned Residues22
% Identity27%Templatec1zreB_
PDB info PDB header:gene regulation/dnaChain: B: PDB Molecule:catabolite gene activator; PDBTitle: 4 crystal structures of cap-dna with all base-pair2 substitutions at position 6, cap-[6g;17c]icap38 dna
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110......
Predicted Secondary structure 






Query SS confidence 





















Query Sequence  PSPGVIYPTLDFLQEQSLITIR
Query Conservation   
 




 
  

  


   
Alig confidence 





















Template Conservation   

 



 
  
   


   
Template Sequence  CSRETVGRILKMLEDQNLISAH
Template Known Secondary structure  S
TTTS
Template Predicted Secondary structure 




Template SS confidence 





















   178.180.........190.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions