Job Description P0ABL8 Confidence 0.75% Date Thu Jan 5 11:15:48 GMT 2012 Rank 67 Aligned Residues 139 % Identity 11% Template c3aqpB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: crystal structure of secdf, a translocon-associated membrane protein,2 from thermus thrmophilus Resolution 3.30 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		L	R	V	A	F	R	H	S	A	E	I	A	N	P	L	W	F	F	L	I	V	I	T	L	F	P	L	S	.	I	G	P	E	P	Q	L	L	A	R	I	A	P	G	I	I	W	V	A	A	L	L	S	S	L	L	A	L	E	R	L	F	R	D	D	L	Q	D	G	S	L	E	Q	L	M	L	L	P	L	P	L
Query Conservation																														.
Alig confidence																														.																																								.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.
Template Sequence		I	F	A	Y	Y	G	P	H	L	G	L	V	A	S	L	G	L	L	Y	T	S	A	L	I	L	G	L	L	S	G	L	G	A	T	L	T	L	P	G	I	A	G	L	V	L	T	L	G	A	A	V	D	G	N	V	L	S	F	E	R	I	K	E	E	L	R	A	G	.	.	.	.	.	.	.	K	K	L	R	Q
Template Known Secondary structure							T																																																													T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.								.	.	.	360	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	V	V	L	A	K	V	M	A	H	W	M	V	T	G	L	P	L	L	I	L	S	P	L	V	A	M	L	L	G	M	D	V	Y	G	W	Q	V	M	A	L	T	L	L	L	G	T	P	T	L	G	F	L	G	A	P	G	V	A	L	T	V	G	L	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	P	E	G	F	R	H	S	T	L	T	I	M	D	V	N	I	A	H	L	L	A	A	A	A	L	Y	Q	Y	A	T	G	P	V	R	G	F	A	V	I	L	A	I	G	V	V	A	S	V	F	S	N	L	V	F	S	R	H	L	L	E	R	L	A	D	R
Template Known Secondary structure																															T			T
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions