Job Description P75798 Confidence 99.76% Date Thu Jan 5 12:14:17 GMT 2012 Rank 8 Aligned Residues 279 % Identity 11% Template c3fh6F_ PDB info PDB header:transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli Resolution 4.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.									40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.
Query Sequence		M	L	N	Y	V	I	K	R	L	L	G	L	I	P	T	L	F	I	V	S	V	L	V	F	L	F	V	H	M	L	P	G	D	P	A	R	L	I	A	.	.	.	.	.	.	.	.	G	P	E	A	D	A	Q	V	I	E	L	V	R	Q	Q	L	G	L	D	Q	P	L	Y	H	Q	F	W	H	Y	I	S	N	A
Query Conservation																																									.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.							.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Template Sequence		I	T	T	L	I	L	S	S	A	G	L	Y	I	Y	V	Y	P	G	M	A	G	M	G	L	F	V	L	F	.	.	.	.	.	P	L	V	C	T	I	A	I	A	F	T	N	Y	S	S	T	N	Q	L	T	F	E	R	A	Q	E	V	L	L	D	R	S	K	N	F	T	R	V	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																											T			.	.	.	.	.							T	T	S	S	S	S		S	S	S		S	S											T				T	T				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	G	D	F	G	L	S	M	V	S	R	R	P	V	A	D	E	I	A	S	R	F	M	P	T	L	W	L	T	I	T	S	M	V	W	A	V	I	F	G	M	A	A	G	I	I	A	A	V	W	R	N	R	W	P	D	R	L	S	M	T	I	A	V	S	G	I	S	F	P	A	F	A	L	G	M	L	L	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																																										.
Template Conservation		.	.	.	.	.	.	.	.	.																																										.
Template Sequence		.	.	.	.	.	.	.	.	.	F	T	D	E	G	I	Q	K	P	F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	.	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I	F	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		S		S	S	S		S																																T		.	S	S	S	S															S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																										.
Template SS confidence
											268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	F	S	V	E	L	G	W	L	.	.	.	.	.	.	.	.	.	.	.	P	T	V	G	A	D	S	W	Q	H	Y	I	L	P	S	L	T	L	G	A	A	V	A	A	V	M	A	R	F	T	R	A	S	F	V	D	V	L	S	E	D	Y	M	R	T	A	R	A	K	G	V	S	E	T	W	V	V	L	K
Query Conservation												.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																																						.
Template Conservation																																																												.
Template Sequence		G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F	G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	.	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K
Template Known Secondary structure				S		S	S	S	S										S	S					S	S	S	S																															S	.															S
Template Predicted Secondary structure																																																												.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.															.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	G	L	R	N	A	M	I	P	V	V	T	M	M	G	L	Q	F	G	F	L	L	G	G	S	I	V	V	E	K	V	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	P	G	L	G	R	L	L	V	D	S	V	E	M	R	D	Y	P	V	I	Q	A	E	I	L	L	F	S	L	E	F	I	L
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L
Template Known Secondary structure		T	T	T	T	T	T																	T										S	S		S			S	S		S	S	S			S	S										T	T		S	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	L	V	V	D	V	L	Y	A	A	I	N	P	A	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	G	A	L	A	I	V	N	L	K	A	T	R	M	K	F
Template Known Secondary structure														S	S
Template Predicted Secondary structure
Template SS confidence
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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