Return to main results Retrieve Phyre Job Id

Job DescriptionA5A614
Confidence48.55%DateThu Jan 5 10:55:19 GMT 2012
Rank1Aligned Residues37
% Identity24%Templated1ldda_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain SCF ubiquitin ligase complex WHB domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40......
Predicted Secondary structure 


Query SS confidence 




































Query Sequence  AERIDIVLDILVAGDYHSAIHNLEILKAELLRQVAES
Query Conservation 
 




























  
   
Alig confidence 




































Template Conservation 
 


 





         
  

  

  

 
 
Template Sequence  LHKIHSFLKITVPKDWGYNRITLQQLEGYLNTLADEG
Template Known Secondary structure  S
GGG

TT

TT
Template Predicted Secondary structure 











Template SS confidence 




































   797..800.........810.........820.........830...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions