 |
Job Description | A5A614 | Confidence | 1.33% | Date | Thu Jan 5 10:55:19 GMT 2012 |
Rank | 85 | Aligned Residues | 21 |
% Identity | 33% | Template | c2l0gA_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:dna polymerase iota; |
PDBTitle: solution nmr structure of ubiquitin-binding motif (ubm2) of human2 polymerase iota
|
Resolution | UNK |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | F | D | A | Q | R | V | A | E | R | I | D | I | V | L | D | I | L | V | A |
Query Conservation |   |
|
|   |   |
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
S | D | I | D | P | Q | V | F | Y | E | L | P | E | A | V | Q | K | E | L | L | A |
Template Known Secondary structure |   |
S | S |
|
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
681 | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|