 |
Job Description | P77634 | Confidence | 52.35% | Date | Thu Jan 5 12:31:19 GMT 2012 |
Rank | 425 | Aligned Residues | 61 |
% Identity | 23% | Template | d2icta1 |
SCOP info | lambda repressor-like DNA-binding domains
| lambda repressor-like DNA-binding domains
| SinR domain-like
|
Resolution | 1.63 |
|
 |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 200 | . | |
. | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | C | Y | N | L | L | L | S | E | P | G | T | K | W | T | A | N | K | V | A | R | Y | L | Y | I | S | V | S | T | L | H | R | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | A | S | . |
E | G | V | S | F | Q | S | I | L | D | D | V | R | L | N | N | A | L | S | A | I | Q | T | T | V | K | P |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|
|   |   |   |
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   | . |   |
|   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   | . | . | . |   |   |
|
|
|
|   |
|
|
|   |   |   |
|
|
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|
|
|   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | I | I | Q | E | S | L | D | . |
. |
. |
E | L | N | V | S | L | R | E | F | A | R | A | X | E | I | A | P | S | T | A | S | R | L | L | T | G | K | A | A | L | T | P | E | X | A | I | K | L | S | V | V | I | G | S | S | P | Q | X | W | L | N | L | Q | N | A | W | S | L | A | E | A | E | K | T | V | D | V | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . |  |  | T |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  | T | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | |
|
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|