 |
Job Description | P77634 | Confidence | 72.49% | Date | Thu Jan 5 12:31:19 GMT 2012 |
Rank | 301 | Aligned Residues | 58 |
% Identity | 9% | Template | d1sq8a_ |
SCOP info | lambda repressor-like DNA-binding domains
| lambda repressor-like DNA-binding domains
| Phage repressors
|
Resolution | UNK |
|
 |
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | S | R | C | Y | N | L | L | L | S | E | P | G | T | K | W | T | A | N | K | V | A | R | Y | L | Y | I | S | V | S | T | L | H | R | R | L | A | S | E | G | V | S | F | Q | S | I | L | D | D | V | R | L | N | N | A | L | S | A | I | Q | T | T | V | K | P | I | S | E | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|
|   |   |   |
|   |
|   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |
|   | . | . | . |   |   |   |
|
|
|   |   |
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |
|   | . | . |
|   |   |   |   |   | . | . | . | . |   |   |
|   |   |
|
|   |   |
| . | . | . |   |
|   |   |   |   |
|
Template Sequence |   |
M | G | E | R | I | R | A | R | R | I | . |
. |
. |
Q | L | G | L | N | Q | A | E | L | A | Q | K | V | G | V | D | Q | Q | A | I | E | Q | L | E | N | . |
. |
G | K | A | K | R | P | . |
. |
. |
. |
R | F | L | P | E | L | A | R | A | L | . |
. |
. |
G | V | A | V | D | W | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . |  | T | T |
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  | . | . | T |
|
| S | S |
| . | . | . | . | T | T |  |  |  |  |  |  |  |  | . | . | . | T | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | |
|
|
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
. | . | . | 40 | . | . | |
|
|
|
. | . | . | . | . | . | . | 50 | . | . | |
|
|
. | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|