Phyre 2 alignment of P77634 with c3o60A

Job Description P77634
Confidence 59.02% Date Thu Jan 5 12:31:19 GMT 2012

Rank 378 Aligned Residues 74

% Identity 8% Template c3o60A_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin0861 protein; PDBTitle: the crystal structure of lin0861 from listeria innocua to 2.8a

Resolution 2.80 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	161	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure														.																																.
Query SS confidence														.																																.
Query Sequence	Q	S	L	I	S	R	C	Y	N	L	L	L	S	.	E	P	G	T	K	W	T	A	N	K	V	A	R	Y	L	Y	I	S	V	S	T	L	H	R	R	L	A	S	E	G	V	.	S	F	Q	S	I	L	D	D	V	R	L	N	N	A	L	S	A	I	Q	T	T	V	K	P	I	S	E	I	A	R	E	N
Query Conservation														.																																.
Alig confidence														.																												.	.			.
Template Conservation																																										.	.
Template Sequence	T	K	L	Y	T	V	L	E	R	F	Y	V	E	D	R	T	F	E	S	I	S	I	K	D	L	C	E	Q	A	R	V	S	R	A	T	F	Y	R	H	H	K	.	.	E	I	I	Q	V	I	E	V	Q	I	L	R	T	X	Q	Y	F	S	L	E	F	D	Q	I	I	L	T	K	E	N	I	Q	R	L	I
Template Known Secondary structure													T	T			T	T	T											T											S	.	.	S	T																					T	S
Template Predicted Secondary structure																																										.	.
Template SS confidence
	22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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