 |
Job Description | P77634 | Confidence | 97.22% | Date | Thu Jan 5 12:31:19 GMT 2012 |
Rank | 57 | Aligned Residues | 76 |
% Identity | 13% | Template | c3l2hD_ |
PDB info |
PDB header:isomerase | Chain: D: PDB Molecule:putative sugar phosphate isomerase; |
PDBTitle: crystal structure of putative sugar phosphate isomerase (afe_0303)2 from acidithiobacillus ferrooxidans atcc 23270 at 1.85 a resolution
|
Resolution | 1.85 Å |
|
 |
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | T | N | L | K | I | E | E | I | R | M | H | K | H | H | E | I | H | R | V | K | P | L | M | P | A | L | C | R | I | R | Q | G | K | K | V | I | N | W | E | T | H | T | L | T | V | D | N | N | Q | I | I | L | F | P | C | G | . |
Y | E | F | Y | I | E | N | Y | P | E | A | G | L | Y | L | A | E | M | L | Y |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |
|   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |
|
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|   | . |
|
|
|   |   |
|
|
|
|
Template Sequence |   |
H | X | G | I | H | L | I | Q | I | E | P | G | K | E | S | T | E | Y | H | L | H | H | Y | E | E | E | A | V | Y | V | L | S | G | K | G | T | L | T | X | E | N | D | Q | Y | P | I | A | P | G | D | F | V | G | F | P | C | H | A | A | A | H | S | I | S | N | D | G | T | . |
E | T | L | V | C | L | V | I | G |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |
| T | T |
| B | S | S | S | S | B |  |  | S | S |
|
|  |  |  |  |  |  |  | S |
|  |  |  |  |  | T | T |  |  |  |  |  |
| T | T |
|  |  |  |  |
| T | T | S |
|
|  |  |  |  |
|
| S | S | . | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|