Job Description P77634 Confidence 78.80% Date Thu Jan 5 12:31:19 GMT 2012 Rank 260 Aligned Residues 91 % Identity 15% Template c3gziA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a transcriptional regulator of the tetr family2 (shew_3567) from shewanella loihica pv-4 at 2.05 a resolution Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		Q	S	L	I	S	R	C	Y	N	L	L	L	S	E	P	G	T	K	W	T	A	N	K	V	A	R	Y	L	Y	I	S	V	S	T	L	H	R	R	L	A	.	S	E	G	V	S	F	Q	S	I	L	D	D	V	R	L	N	N	A	L	S	A	I	Q	T	T	V	K	P	I	S	E	I	A	R	E	N	G	Y	K
Query Conservation																																										.
Alig confidence																																										.				.	.																		.	.	.	.	.	.	.
Template Conservation																																														.	.																		.	.	.	.	.	.	.
Template Sequence		D	K	L	I	L	A	A	R	N	L	F	I	E	R	P	Y	A	Q	V	S	I	R	E	I	A	S	L	A	G	T	D	P	G	L	I	R	Y	Y	F	G	S	K	E	K	.	.	L	F	S	T	X	I	H	E	T	A	X	P	V	L	A	Q	L	.	.	.	.	.	.	.	H	K	A	R	R	E	T	R	Q	E
Template Known Secondary structure														T	S			S												T	S		T								S	S				.	.																		.	.	.	.	.	.	.						T	S		T	T
Template Predicted Secondary structure																																														.	.																		.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.								80	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	S	R	F	T	E	R	F	H	N	R	F	N	I	T	P	R	E	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	A	A	L	L	Q	T	Y	Y	S	V	X	S	K	H	P	H	F	P	R
Template Known Secondary structure																	S	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions