 |
Job Description | P77634 | Confidence | 48.19% | Date | Thu Jan 5 12:31:19 GMT 2012 |
Rank | 445 | Aligned Residues | 79 |
% Identity | 13% | Template | c3eqeB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:putative cystein deoxygenase; |
PDBTitle: crystal structure of the yubc protein from bacillus2 subtilis. northeast structural genomics consortium target3 sr112.
|
Resolution | 2.82 Å |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | T | N | L | K | I | E | E | I | R | M | H | K | H | H | E | I | H | R | V | K | P | L | M | P | A | L | C | R | I | R | Q | G | K | K | V | I | N | W | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | T | H | T | L | T | V | D | N | N | Q | I | I | L | F | P | C | G | Y | E | F | Y | I | E | N | Y | P | E | A | G | L |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
  |   |   |
|
|   |
|
|   |
|   |
|
|
|   |
|   |
|
|
|
|   |   |
|   | . |   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   | . |   |   |
Template Sequence |   |
N | E | L | E | I | I | V | I | N | I | P | P | N | K | E | T | T | V | H | D | H | G | Q | S | I | . |
G | C | A | X | V | L | E | G | K | L | L | N | S | I | Y | R | S | T | G | E | H | A | E | L | S | N | S | Y | F | V | H | E | G | E | C | L | I | S | T | K | G | L | I | H | K | X | S | N | P | T | S | . |
E | R |
Template Known Secondary structure |   |
S | S |
|  |  |  |  |  |  |  |
| T | T |
| B |
|
|  |  |  |
| T | T |
|  | . |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |
|
| S | S | S |
|
|
|
| S |  |  |  |  |  |  | T | T |
|  |  |  |  |
| T | T |
|  |  |  |  |  |
|
| S | S | . | S |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
| . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
. | . |
  |
  |   |
76 | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | L | A | E | M | L | Y | L | P | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
X | V | S | L | H | V | Y | S | P | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
135 | . | . | . | . | 140 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|