Job Description P77634 Confidence 87.10% Date Thu Jan 5 12:31:19 GMT 2012 Rank 147 Aligned Residues 82 % Identity 9% Template c3dpjB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:transcription regulator, tetr family; PDBTitle: the crystal structure of a tetr transcription regulator2 from silicibacter pomeroyi dss Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																															.	.			.
Query SS confidence																																															.	.			.
Query Sequence		L	L	S	Y	S	K	Q	S	L	I	S	R	C	Y	N	L	L	L	S	E	P	G	T	K	W	T	A	N	K	V	A	R	Y	L	Y	I	S	V	S	T	L	H	R	R	L	.	.	A	S	.	E	G	V	S	F	Q	S	I	L	D	D	V	R	L	N	N	A	L	S	A	I	Q	T	T	V	K	P	I	S	E
Query Conservation																																															.	.			.
Alig confidence																																															.	.			.
Template Conservation
Template Sequence		V	Q	A	Q	T	R	D	Q	I	V	A	A	A	D	E	L	F	Y	R	Q	G	F	A	Q	T	S	F	V	D	I	S	A	A	V	G	I	S	R	G	N	F	Y	Y	H	F	K	T	K	D	E	I	L	A	E	V	I	R	L	R	L	A	R	T	A	Q	X	L	A	D	W	Q	G	T	G	D	S	P	R	A	R
Template Known Secondary structure			T	T																			S	T	T											T								T	T		S																										T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		232	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	R	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	S	F	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions