 |
Job Description | P77634 | Confidence | 52.41% | Date | Thu Jan 5 12:31:19 GMT 2012 |
Rank | 424 | Aligned Residues | 34 |
% Identity | 21% | Template | c3cuoB_ |
PDB info |
PDB header:transcription regulator | Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav; |
PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli
|
Resolution | 2.00 Å |
|
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | C | Y | N | L | L | L | S | E | P | G | T | K | W | T | A | N | K | V | A | R | Y | L | Y | I | S | V | S | T | L | H | R | R | L | A | S |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|
|   |   |   |
|   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |   | . | . |   |   |   |   |   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|
|   |
|
|   |   |
Template Sequence |   |
L | I | L | C | M | L | S | G | S | . |
. |
P | G | T | S | A | G | E | L | T | R | I | T | G | L | S | A | S | A | T | S | Q | H | L | A | R |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
| . | . | S |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
28 | . | 30 | . | . | . | . | . | . | |
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|