Job Description P77634 Confidence 99.93% Date Thu Jan 5 12:31:19 GMT 2012 Rank 2 Aligned Residues 105 % Identity 22% Template c1d5yD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:rob transcription factor; PDBTitle: crystal structure of the e. coli rob transcription factor2 in complex with dna Resolution 2.70 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		K	Q	S	L	I	S	R	C	Y	N	L	L	L	S	E	P	G	T	K	W	T	A	N	K	V	A	R	Y	L	Y	I	S	V	S	T	L	H	R	R	L	A	S	.	E	G	V	S	F	Q	S	I	L	D	D	V	R	L	N	N	A	L	S	A	I	Q	T	T	V	K	P	I	S	E	I	A	R	E	N	G	Y
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		Q	A	G	I	I	R	D	L	L	I	W	L	E	G	H	L	D	Q	P	L	S	L	D	N	V	A	A	K	A	G	Y	S	K	W	H	L	Q	R	M	F	K	D	V	T	G	H	A	I	G	A	Y	I	R	A	R	R	L	S	K	S	A	V	A	L	R	L	T	A	R	P	I	L	D	I	A	L	Q	Y	R	F
Template Known Secondary structure														T	T	T	S	S	S	S				T	T	T	T	T	T	T	S	S														S	S																																T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	C	P	S	R	F	T	E	R	F	H	N	R	F	N	I	T	P	R	E	I	R	K	A	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	Q	Q	T	F	T	R	A	F	K	K	Q	F	A	Q	T	P	A	L	Y	R	R	S	P	E
Template Known Secondary structure		S	S													S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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