 |
Job Description | B8LFD5 | Confidence | 90.51% | Date | Thu Jan 5 10:55:39 GMT 2012 |
Rank | 325 | Aligned Residues | 37 |
% Identity | 19% | Template | d1r71a_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| KorB DNA-binding domain-like
| KorB DNA-binding domain-like
|
Resolution | 2.20 |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | P | V | T | L | Y | D | V | A | E | Y | A | G | V | S | Y | Q | T | V | S | R | V | V | N | Q | A | S | H | V | S | A | K | T | R | E | K | V | E |
Query Conservation |   |
|
|   |
|
|   |
|
|
|   |   |
|
|
|
|   |   |
|
|
|
|
|
|
|   |   |   |   |
|
|   |   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |
|
|   |   |
|
|   |
|   |
|   |
|
|   |   |
|   |
|   |   | . |
|
|   |   |
|   |   |   |   |   |
Template Sequence |   |
K | G | K | K | K | G | D | I | A | K | E | I | G | K | S | P | A | F | I | T | Q | H | V | T | L | L | D | . |
L | P | E | K | I | A | D | A | F | N |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  | G | G | G | S | . |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | |
. | . | . | . | . | . | 200 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|