Job Description B8LFD5 Confidence 79.27% Date Thu Jan 5 10:55:39 GMT 2012 Rank 493 Aligned Residues 41 % Identity 10% Template c3m1eA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: crystal structure of benm_dbd Resolution 1.80 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.															.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	Y	D	V	A	E	Y	A	G	V	S	Y	Q	T	V	S	R	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	A	S	H	V	S	A	K	T	R	E	K	V	E	A	A	M	A	E	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	T	K	A	A	D	K	L	C	I	A	Q	P	P	L	S	R	Q	I	Q	N	L	E	E	E	L	G	I	Q	L	L	E	R	G	S	R	P	V	K	T	T	P	E	G	H	F	F	Y	Q	Y	A	I	K	L
Template Known Secondary structure										T	T	S																	T	S			B		T	T		S	S			B
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions