Job Description B8LFD5 Confidence 95.58% Date Thu Jan 5 10:55:39 GMT 2012 Rank 120 Aligned Residues 40 % Identity 13% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.													30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	Y	D	V	A	E	Y	A	G	V	S	Y	Q	T	V	S	R	V	V	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	A	S	H	V	S	A	K	T	R	E	K	V	E	A	A	M	A	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N
Template Known Secondary structure											T												S	G	G	G	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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