Job Description B8LFD5 Confidence 83.93% Date Thu Jan 5 10:55:39 GMT 2012 Rank 457 Aligned Residues 44 % Identity 16% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.																.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Query Sequence		K	P	V	T	L	Y	D	V	A	E	Y	A	G	V	S	Y	Q	T	V	S	R	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	A	S	H	.	.	.	.	V	S	A	K	T	R	E	K	V	E	A	A	M	A	E	L
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Template Conservation
Template Sequence		N	T	L	P	F	K	K	I	V	S	D	L	C	Y	K	Q	S	D	L	V	Q	H	I	K	V	L	V	K	H	S	Y	I	S	K	V	R	S	K	I	D	E	R	N	T	Y	I	S	I	S	E	E	Q	R	E	K	I	A	E	R	V	T	L	F
Template Known Secondary structure		S											S	S	S		G	G	G	T										T	T	S							S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions