Job Description P33919 Confidence 100.00% Date Thu Jan 5 11:52:45 GMT 2012 Rank 24 Aligned Residues 281 % Identity 17% Template c3rc8A_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase supv3l1, mitochondrial; PDBTitle: human mitochondrial helicase suv3 in complex with short rna fragment Resolution 2.90 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		H	K	T	P	A	V	I	V	L	P	T	G	A	G	K	S	L	V	I	A	E	L	A	R	L	A	R	G	R	V	L	V	L	A	H	V	K	E	L	V	A	Q	N	H	A	K	Y	Q	A	L	G	L	E	A	D	I	F	A	A	G	L	K	R	K	E	S	.	.	.	.	H	G	K	V	V	F	G	S	V	Q
Query Conservation																																																																				.	.	.	.
Alig confidence																											.																																									.	.	.	.
Template Conservation																											.
Template Sequence		Q	R	K	I	I	F	H	S	G	P	T	N	S	G	K	T	Y	H	A	I	Q	K	Y	F	S	.	A	K	S	G	V	Y	C	G	P	L	K	L	L	A	H	E	I	F	E	K	S	N	A	A	G	V	P	C	D	L	V	T	G	E	E	R	V	T	V	Q	P	N	G	K	Q	A	S	H	V	S	C	T	V	E
Template Known Secondary structure											S	S	S	S	S	T	T										.	S	S	S						S	S														T	T								S	S						S	S	S	S				S						G	G
Template Predicted Secondary structure																											.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	A	R	N	L	D	A	F	Q	G	E	F	S	L	L	I	V	D	E	C	H	R	I	G	D	D	E	E	S	Q	Y	Q	Q	I	L	T	H	L	T	K	V	N	P	H	L	R	L	L	G	L	T	A	T	P	F	R	L	G	K	G	W	I	Y	Q	F	H	Y	H	G	M	V	R	G	D	E	K	A	L	F
Query Conservation
Alig confidence				.	.	.	.	.																													.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.																													.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	C	.	.	.	.	.	S	V	T	T	P	Y	E	V	A	V	I	D	E	I	Q	M	I	R	D	P	A	R	G	W	A	W	T	R	.	A	L	L	G	L	C	A	E	E	V	H	L	C	G	E	P	A	A	I	D	L	V	M	E	L	M	Y	T	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G		.	.	.	.	.		S	S	S										G	G	G	G	G		T	T	T							.																G	G	G												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.																													.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.						280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	C	I	Y	E	L	P	L	R	Y	M	I	K	H	G	Y	L	T	P	P	E	R	L	D	M	P	V	V	Q	Y	D	F	S	R	L	Q	A	Q	S	N	G	L	F	S	E	A	D	L	N	R	E	L	K	K	Q	Q	R	I	T	P	H	I	I	S	Q	I	M	E	F	A	A	T	R	K	G	V	M	I	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	V	E	V	R	D	Y	K	R	L	T	P	I	S	V	L	D	H	A	L	E	S	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	R	P	G	D	C	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S						S	S				S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.																												.	.	.	.	.	.	.	370	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.
Predicted Secondary structure																	.	.																								.	.																																		.	.	.
Query SS confidence																	.	.																								.	.																																		.	.	.
Query Sequence		A	A	T	V	E	H	A	K	E	I	V	G	L	L	P	.	.	A	E	D	A	A	L	I	T	G	D	T	P	G	A	E	R	D	V	L	I	E	N	F	.	.	K	A	Q	R	F	R	Y	L	V	N	V	A	V	L	T	T	G	F	D	A	P	H	V	D	L	I	A	I	L	R	P	T	E	.	.	.	S	V
Query Conservation																	.	.																								.	.																																		.	.	.
Alig confidence																	.	.																								.	.																						.												.	.	.
Template Conservation																																																																	.
Template Sequence		C	F	S	K	N	D	I	Y	S	V	S	R	Q	I	E	I	R	G	L	E	S	A	V	I	Y	G	S	L	P	P	G	T	K	L	A	Q	A	K	K	F	N	D	P	N	D	P	C	K	I	L	V	A	T	D	A	I	G	M	G	L	N	L	S	.	I	R	R	I	I	F	Y	S	L	I	K	E	P	I	T	T
Template Known Secondary structure			S	S														T	T								T	T	S															T	T		S								G	G	G	G	S	S					.	B	S					S		S	B			B
Template Predicted Secondary structure																																																																	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	Y	Q	Q	I	V	G	R	G	L	R	L	A	P	G	K	T	D	C	L	I	L	D	Y	A	G	N	P	H	D	L	Y	A	P	E	V	G	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	A	L	Q	I	A	G	R	A	G	R	F	S	S	R	F	K	E	G	E	V	T	T	M	N	H	E	D	L	S	L	L	K	E	I	L	K	R	P
Template Known Secondary structure									T	T	B				T	T	T			S						S	S												T	S
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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