Return to main results Retrieve Phyre Job Id

Job DescriptionP33919
Confidence97.86%DateThu Jan 5 11:52:45 GMT 2012
Rank167Aligned Residues84
% Identity29%Templatec3pvsA_
PDB info PDB header:recombinationChain: A: PDB Molecule:replication-associated recombination protein a; PDBTitle: structure and biochemical activities of escherichia coli mgsa
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910..... ....20.... .....30.........40.........50.........60.........70.........80....
Predicted Secondary structure  ...

.






















Query SS confidence 






. . .








.



























































Query Sequence  QQEAVDA. . . TLNHFRRHK. TPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLK
Query Conservation 
  

  ...         .   

   





             

 
 
   
  
                    
Alig confidence 






...








.















































............
Template Conservation 
         
   
      



 










  

      

 


    
  

 

  
............
Template Sequence  QQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERA. . . . . . . . . . . .
Template Known Secondary structure 
STTST



STTSSTT
TTT

............
Template Predicted Secondary structure 



















............
Template SS confidence 















































































   31........40.........50.........60.........70.........80.........90........
 
   85....90.........100.........110.........120..
Predicted Secondary structure 











Query SS confidence 





































Query Sequence  RKESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECHRI
Query Conservation         
 
 
   
             






  
Alig confidence  ..................



















Template Conservation  ..................          






 

Template Sequence  . . . . . . . . . . . . . . . . . . RQNRNAGRRTILFVDEVHRF
Template Known Secondary structure  ..................TT

TTT

Template Predicted Secondary structure  ..................





Template SS confidence 





































   99100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions