Job Description P33919 Confidence 99.82% Date Thu Jan 5 11:52:45 GMT 2012 Rank 76 Aligned Residues 154 % Identity 19% Template c3llmB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase a; PDBTitle: crystal structure analysis of a rna helicase Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.									.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.																									.	.
Query SS confidence																																																.	.	.	.	.	.	.	.																									.	.
Query Sequence		I	F	T	L	R	P	Y	Q	Q	E	A	V	D	A	T	L	N	H	F	R	R	H	K	T	P	A	V	I	V	L	P	T	G	A	G	K	S	L	V	I	A	E	L	A	R	L	.	.	.	.	.	.	.	.	A	R	G	R	V	L	V	L	A	H	V	K	E	L	V	A	Q	N	H	A	K	Y	Q	A	.	.
Query Conservation																																																.	.	.	.	.	.	.	.																									.	.
Alig confidence																			.	.	.	.	.																									.	.	.	.	.	.	.	.																									.	.
Template Conservation																			.	.	.	.	.
Template Sequence		L	L	P	V	K	K	F	E	S	E	I	L	E	A	I	S	Q	.	.	.	.	.	N	S	V	V	I	I	R	G	A	T	G	C	G	K	T	T	Q	V	P	Q	F	I	L	D	D	F	I	Q	N	D	R	A	A	E	C	N	I	V	V	T	Q	P	R	R	I	S	A	V	S	V	A	E	R	V	A	F	E	R
Template Known Secondary structure		T	S	G	G	G	G	G											.	.	.	.	.		S								T	T	S	S																T	T		G	G	G								S	S														T	T
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.						.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
					72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																	.
Query SS confidence		.	.	.																	.
Query Sequence		.	.	.	L	G	L	E	A	D	I	F	A	A	G	L	K	R	K	E	.	S	H	G	K	V	V	F	G	S	V	Q	S	V	A	R	N	L	D	A	F	Q	G	E	F	S	L	L	I	V	D	E	C	H	R	I	G	D	D	E	E	S	Q	Y	Q	Q	I	L	T	H	L	T	K	V	N	P	H	L	R	L	L
Query Conservation		.	.	.																	.
Alig confidence		.	.	.																	.																																		.
Template Conservation																																																							.
Template Sequence		G	E	E	P	G	K	S	C	G	Y	S	V	R	F	E	S	I	L	P	R	P	H	A	S	I	X	F	C	T	V	G	V	L	L	R	K	L	E	A	G	I	R	G	I	S	H	V	I	V	D	E	I	H	.	E	R	D	I	N	T	D	F	L	L	V	V	L	R	D	V	V	Q	A	Y	P	E	V	R	I	V
Template Known Secondary structure		T			T	T	S	S						T	T							S	S	S																			T	T									T	T	.	S																				T	T	S
Template Predicted Secondary structure																																																							.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.		.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	T	A	T	P	F	R	L	G	K	G	W	I	Y
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		L	X	S	A	T	I	.	D	T	S	X	F	C	E	Y
Template Known Secondary structure					S	S	S	.
Template Predicted Secondary structure								.
Template SS confidence
		541	.	.	.	.	.		.	.	.	550	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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