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Job DescriptionP33919
Confidence97.28%DateThu Jan 5 11:52:45 GMT 2012
Rank194Aligned Residues80
% Identity16%Templatec3hjhA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:transcription-repair-coupling factor; PDBTitle: a rigid n-terminal clamp restrains the motor domains of the bacterial2 transcription-repair coupling factor
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80......
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Query Sequence  RHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRK. . . . . . . . . . . . . . .
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Template Sequence  KAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSR
Template Known Secondary structure  STT



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   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   87..90.........100.
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Query Sequence  . . . . . . . . ESHGKVVFGSVQSVA
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Template Sequence  LSTLYQLPTMQRGVLIVPVNTLM
Template Known Secondary structure  GGG

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   92.......100.........110....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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