Job Description P33919 Confidence 99.82% Date Thu Jan 5 11:52:45 GMT 2012 Rank 77 Aligned Residues 158 % Identity 20% Template c3fe2B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:probable atp-dependent rna helicase ddx5; PDBTitle: human dead-box rna helicase ddx5 (p68), conserved domain i in complex2 with adp Resolution 2.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.												.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	R	P	Y	Q	Q	E	A	V	D	A	T	L	N	H	F	R	R	H	K	T	P	A	V	I	V	L	P	T	G	A	G	K	S	L	V	I	A	E	L	A	R	L	A	.	.	.	.	.	.	.	.	.	.	.	R	G	R	V	L	V	L	A	H	V	K	E	L	V	A	Q	N	H	A	K	Y	Q	A	L
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		E	P	T	A	I	Q	A	Q	G	W	P	V	A	L	S	.	.	.	.	.	G	L	D	M	V	G	V	A	Q	T	G	S	G	K	T	L	S	Y	L	L	P	A	I	V	H	I	N	H	Q	P	F	L	E	R	G	D	G	P	I	C	L	V	L	A	P	T	R	E	L	A	Q	Q	V	Q	Q	V	A	A	E	Y
Template Known Secondary structure		S														T	.	.	.	.	.	T									T	T	S																T	S					T	T				S						S	S
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
						73	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																.	.	.	.	.	.																							.	.	.
Query SS confidence		.	.	.	.																.	.	.	.	.	.																							.	.	.
Query Sequence		.	.	.	.	G	L	E	A	D	I	F	A	A	G	L	K	R	K	E	.	.	.	.	.	.	S	H	G	K	V	V	F	G	S	V	Q	S	V	A	R	N	L	D	A	F	Q	G	.	.	.	E	F	S	L	L	I	V	D	E	C	H	R	I	G	D	D	E	E	S	Q	Y	Q	Q	I	L	T	H	L	T	K
Query Conservation		.	.	.	.																.	.	.	.	.	.																							.	.	.
Alig confidence		.	.	.	.																.	.	.	.	.	.																							.	.	.																								.	.
Template Conservation																																																																											.	.
Template Sequence		C	R	A	C	R	L	K	S	T	C	I	Y	G	G	A	P	K	G	P	Q	I	R	D	L	E	R	G	V	E	I	C	I	A	T	P	G	R	L	I	D	F	L	E	C	G	K	T	N	L	R	R	T	T	Y	L	V	L	D	E	A	D	R	M	L	D	M	G	F	E	P	Q	I	R	.	.	K	I	V	D	Q
Template Known Secondary structure					T	T								T	T	S											S			S															T	T	S				T	T							T	T							T	T							.	.					T
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	P	H	L	R	L	L	G	L	T	A	T	P	F	R	L	G	K	G	W	I	Y	Q	F	H	Y	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	P	D	R	Q	T	L	M	W	S	A	T	W	P	K	E	V	R	Q	L	A	E	D	F	L	K	D	Y
Template Known Secondary structure		S		T	T								S															S	S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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