Job Description P33919 Confidence 95.87% Date Thu Jan 5 11:52:45 GMT 2012 Rank 264 Aligned Residues 107 % Identity 15% Template c3e2iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from s. aureus Resolution 2.01 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		V	I	V	L	P	T	G	A	G	K	S	L	V	I	A	E	L	A	R	L	A	.	.	.	R	G	R	V	L	V	L	A	H	V	K	E	L	V	A	Q	N	H	A	K	Y	Q	A	L	G	L	E	A	D	I	F	A	A	G	L	K	R	K	E	S	H	G	K	V	V	F	G	S	V	Q	S	V	A	R	N	L
Query Conservation																							.	.	.
Alig confidence																							.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	I	T	G	S	X	F	S	G	K	S	E	E	L	I	R	R	L	R	R	G	I	Y	A	K	Q	K	V	V	V	F	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	H	N	G	N	A	I	E	A	I	N	I	S	K	A	S	E	I	X
Template Known Secondary structure							T	T	S																T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	T	T	B								S	S	G	G	G	G	G
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																												.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	F	Q	G	E	F	S	L	L	I	V	D	E	C	H	R	I	G	D	D	E	E	S	Q	Y	Q	Q	I	L	T	H	L	T	K	V	N	P	H	L	R	L	L	G	L	T	A	T	P	F	R	L	G	K	G	W	I	Y	Q	F	H
Query Conservation
Alig confidence																						.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		T	H	D	L	T	N	V	D	V	I	G	I	D	E	V	Q	F	F	D	D	.	.	.	.	E	I	V	S	I	V	E	K	L	S	A	D	G	H	R	V	I	V	A	G	L	D	X	D	F	R	G	E	P	F	E	P	X	P	K	L	X
Template Known Secondary structure		G	S			T	T		S							G	G	G	S		T	.	.	.	.												T	T									S	B		T	T	S		B		T	T
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions