Job Description P33919 Confidence 99.71% Date Thu Jan 5 11:52:45 GMT 2012 Rank 108 Aligned Residues 158 % Identity 20% Template c3berA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx47; PDBTitle: human dead-box rna-helicase ddx47, conserved domain i in complex with2 amp Resolution 1.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.
Query Sequence		T	L	R	P	Y	Q	Q	E	A	V	D	A	T	L	N	H	F	R	R	H	K	T	P	A	V	I	V	L	P	T	G	A	G	K	S	L	V	I	A	E	L	A	R	L	A	.	.	.	.	.	.	R	G	R	V	L	V	L	A	H	V	K	E	L	V	A	Q	N	H	A	K	Y	Q	A	L	G	L	E	A	D
Query Conservation																																															.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		K	P	T	K	I	Q	I	E	A	I	P	L	A	L	Q	.	.	.	.	.	G	R	D	I	I	G	L	A	E	T	G	S	G	K	T	G	A	F	A	L	P	I	L	N	A	L	L	E	T	P	Q	R	L	F	A	L	V	L	T	P	T	R	E	L	A	F	Q	I	S	E	Q	F	E	A	L	G	S	S	I	G
Template Known Secondary structure		S														T	.	.	.	.	.	T									T	T	S																	S			S	S							S	S																G	G	G	T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		78	.	80	.	.	.	.	.	.	.											.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		I	F	A	A	G	L	K	R	K	E	.	.	.	.	.	.	.	.	.	.	S	H	G	K	V	V	F	G	S	V	Q	S	V	A	R	N	L	D	A	F	Q	G	.	.	.	.	E	F	S	L	L	I	V	D	E	C	H	R	I	G	D	D	E	E	S	Q	Y	Q	Q	I	L	T	H	L	T	K	V	N	P	H
Query Conservation												.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																							.	.	.	.																								.	.
Template Conservation																																																																							.	.
Template Sequence		V	Q	S	A	V	I	V	G	G	I	D	S	M	S	Q	S	L	A	L	A	K	K	P	H	I	I	I	A	T	P	G	R	L	I	D	H	L	E	N	T	K	G	F	N	L	R	A	L	K	Y	L	V	M	D	E	A	D	R	I	L	N	M	D	F	E	T	E	V	D	.	.	K	I	L	K	V	I	P	R	D
Template Known Secondary structure									T	T	S											T			S																S	T	T				T	T								S							T	T							.	.					S	S		S	S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	L	G	L	T	A	T	P	F	R	L	G	K	G	W	I	Y	Q	F	H	Y	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	T	F	L	F	S	A	T	M	T	K	K	V	Q	K	L	Q	R	A	A	L	K	N	P
Template Known Secondary structure		S							S	S														S	S
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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