Job Description P33919 Confidence 99.88% Date Thu Jan 5 11:52:45 GMT 2012 Rank 67 Aligned Residues 145 % Identity 30% Template c3b6eA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:interferon-induced helicase c domain-containing protein 1; PDBTitle: crystal structure of human dech-box rna helicase mda5 (melanoma2 differentiation-associated protein 5), dech-domain Resolution 1.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.
Query Sequence		F	T	L	R	P	Y	Q	Q	E	A	V	D	A	T	L	N	H	F	R	R	H	K	T	P	A	V	I	V	L	P	T	G	A	G	K	S	L	V	I	A	E	L	A	R	L	A	.	.	.	.	.	.	.	.	.	R	G	R	V	L	V	L	A	H	V	K	E	L	V	A	Q	N	H	A	K	Y	Q	A	L	G
Query Conservation																																																.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		L	Q	L	R	P	Y	Q	M	E	V	A	Q	P	A	L	E	.	.	.	.	.	G	K	N	I	I	I	C	L	P	T	G	S	G	K	T	R	V	A	V	Y	I	A	K	D	H	L	D	K	K	K	K	A	S	E	P	G	K	V	I	V	L	V	N	K	V	L	L	V	E	Q	L	F	R	K	E	F	Q	P	F
Template Known Secondary structure																	T	.	.	.	.	.	T								S																							T	T										S	S											T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.						.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.																					.	.																																			.
Query SS confidence																		.	.	.	.	.	.	.																					.	.																																			.
Query Sequence		L	E	A	D	I	F	A	A	G	L	K	R	K	E	S	H	.	.	.	.	.	.	.	G	K	V	V	F	G	S	V	Q	S	V	A	R	N	L	D	A	F	Q	G	.	.	E	F	S	L	L	I	V	D	E	C	H	R	I	G	D	D	E	E	S	Q	Y	Q	Q	I	L	T	H	L	T	K	V	N	P	H	.
Query Conservation																		.	.	.	.	.	.	.																					.	.																																			.
Alig confidence																		.	.	.	.	.	.	.																					.	.																																			.
Template Conservation
Template Sequence		L	K	K	W	Y	R	V	I	G	L	S	G	L	K	I	S	F	P	E	V	V	K	S	C	D	I	I	I	S	T	A	Q	I	L	E	N	S	L	L	N	G	V	Q	L	S	D	F	S	L	I	I	I	D	E	C	V	Y	N	N	I	M	R	H	Y	L	M	Q	K	L	K	N	N	R	L	K	K	E	N	K	P
Template Known Secondary structure			T	T	T	S																				S																			G	G	G		S					T	T																							T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
						144	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	L	R	L	L	G	L	T	A	T
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		V	I	P	L	P	Q	I	L	G	L	T	A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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