Job Description P33919 Confidence 96.00% Date Thu Jan 5 11:52:45 GMT 2012 Rank 256 Aligned Residues 138 % Identity 18% Template c2v1uA_ PDB info PDB header:replication Chain: A: PDB Molecule:cell division control protein 6 homolog; PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna Resolution 3.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.											.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																							.	.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	Y	Q	Q	E	A	V	D	A	T	L	N	H	F	R	R	H	K	T	P	.	.	A	V	I	V	L	P	T	G	A	G	K	S	L	V	I	A	E	L	A	R	L	A	R	G	R	.	.	.	.	.	.	.	.	.	.	V	L	V	L	A	H	V	K	E	L	V	A	Q	N	H	A	K	Y	Q	A	L	G
Query Conservation																							.	.																										.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	A	E	L	R	R	L	A	E	V	L	A	P	A	L	R	G	E	K	P	S	N	A	L	L	Y	G	L	T	G	T	G	K	T	A	V	A	R	L	V	L	R	R	L	E	A	R	A	S	S	L	G	V	L	V	K	P	I	Y	V	N	A	R	H	R	E	T	P	Y	R	V	A	S	A	I	A	E	A	V
Template Known Secondary structure												T	T	G	G	G	T	S	S										B		T	T	S	S																				T										T	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	D	I	F	A	A	G	L	K	R	K	E	S	H	G	K	V	V	F	G	S	V	Q	S	V	A	R	N	L	D	A	F	Q	G	E	F	S	L	L	I	V	D	E	C	H	R	I	G	D	D	E	E	S	Q	Y	Q	Q	I	L	T	H	L	T	K	V	N	P	H	L	R	L	L	G	L	T	A	T	P
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.																																											.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.																																											.	.
Template Sequence		G	V	.	.	.	.	.	.	.	.	.	.	R	V	P	F	T	G	L	S	V	G	E	V	Y	E	R	L	V	K	R	L	S	R	L	R	G	I	Y	I	I	V	L	D	E	I	D	F	L	P	K	R	P	G	.	.	G	Q	D	L	L	Y	R	I	T	R	I	N	Q	E	L	V	S	L	V	G	I	T	N	S
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.	.				S	S																T	T	S		S								T	T	T					S	T	T	.	.											G	G	G										S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																																											.	.
Template SS confidence
		116	.											.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		154	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G
Template Known Secondary structure		S	T
Template Predicted Secondary structure
Template SS confidence
		189	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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