 |
Job Description | P33919 | Confidence | 95.95% | Date | Thu Jan 5 11:52:45 GMT 2012 |
Rank | 260 | Aligned Residues | 53 |
% Identity | 19% | Template | c2r65A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:cell division protease ftsh homolog; |
PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex
|
Resolution | 3.30 Å |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | P | Y | Q | Q | E | A | V | D | A | T | L | N | H | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | R | H | K | T | P | A | V | I | V | L | P | T | G | A | G | K | S | L | V | I | A | E | L | A | R | L | A | R | G | R | V | L | V | L | A | H |
Query Conservation |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | N | E | E | A | K | E | E | V | V | E | I | V | D | F | L | K | Y | P | E | R | Y | A | N | L | G | A | K | I | P | K | G | V | L | L | V | G | P | P | G | T | G | K | T | L | L | A | K | A | V | A | G | E | A | H | V | P | F | F | S | M | G | G |
Template Known Secondary structure |   |
S |
|  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S |
|  |  |  |  | T | T | T |
|
|
|
| S |
|  |  |  |  |
| S | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
| T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|