Return to main results Retrieve Phyre Job Id

Job DescriptionP33919
Confidence97.95%DateThu Jan 5 11:52:45 GMT 2012
Rank161Aligned Residues118
% Identity17%Templatec2hcbC_
PDB info PDB header:replicationChain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus
Resolution3.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40........ .50.........60.........70.........80......
Predicted Secondary structure 










...















Query SS confidence 






































. . .





































Query Sequence  QEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLA. . . RGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRK
Query Conservation    

              

   





          ...   

 
 
   
  
                      
Alig confidence 






































...








.











................
Template Conservation                  



 







 

 


               .            ................
Template Sequence  YEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSA. DDFAQAMVEHLK. . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTTTTTS


SSSSSTT

.................
Template Predicted Secondary structure 















.
................
Template SS confidence 















































































   98.100.........110.........120.........130.........140........ .150.........160
 
   87..90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 
























Query SS confidence 




































































Query Sequence  ESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFR
Query Conservation       
 
 
   
             






                
         
  



  
Alig confidence  ...........

























































Template Conservation  ...........               

 



  
                        

       
Template Sequence  . . . . . . . . . . . KGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQ
Template Known Secondary structure  ...........T

T
S
GGGGTT
STT
SS
GG
Template Predicted Secondary structure  ...........


















Template SS confidence 




































































   161........170.........180.........190.........200.........210........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions