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Job DescriptionP33919
Confidence99.79%DateThu Jan 5 11:52:45 GMT 2012
Rank85Aligned Residues129
% Identity25%Templatec2fzlA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:dna repair protein rad25, xpb; PDBTitle: structure of c-terminal domain of archaeoglobus fulgidus xpb
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EADLNRELKKQQRITPHIISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIENFKAQRFRY
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Template Sequence  WEEARRIAFNSKNKIRKLREILE. . RHRKDKIIIFTRHNELVYRISKVF. . . LIPAITHRTSREEREEILEGFRTGRFRA
Template Known Secondary structure  T
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Query Sequence  LVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYA
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Template Sequence  IVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGRILRPSKGKKEAVLYELI
Template Known Secondary structure  SS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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