Return to main results Retrieve Phyre Job Id

Job DescriptionP33919
Confidence95.71%DateThu Jan 5 11:52:45 GMT 2012
Rank271Aligned Residues40
% Identity25%Templatec2chvE_
PDB info PDB header:dna-binding proteinChain: E: PDB Molecule:replication factor c small subunit; PDBTitle: replication factor c adpnp complex
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.... .....30.........40........
Predicted Secondary structure 

.








Query SS confidence 















.























Query Sequence  QQEAVDATLNHFRRHK. TPAVIVLPTGAGKSLVIAELARLA
Query Conservation 
  

           .   

   





          
Alig confidence 















.























Template Conservation         
   
       


 



 


 

  

  
Template Sequence  QDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDL
Template Known Secondary structure 
GGGTTTT





TTSS
Template Predicted Secondary structure 











Template SS confidence 








































   22.......30.........40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions