Job Description P33919 Confidence 97.06% Date Thu Jan 5 11:52:45 GMT 2012 Rank 203 Aligned Residues 121 % Identity 18% Template c2b8tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from u.urealyticum in2 complex with thymidine Resolution 2.00 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		A	V	I	V	L	P	T	G	A	G	K	S	L	V	I	A	E	L	A	R	L	A	.	.	.	R	G	R	V	L	V	L	A	H	V	K	E	L	V	A	Q	N	H	A	K	Y	Q	A	L	G	L	E	A	D	I	F	A	A	G	L	K	R	K	E	S	H	G	K	V	V	F	G	S	V	Q	S	V	A	R	N
Query Conservation																								.	.	.
Alig confidence																								.	.	.														.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Sequence		E	F	I	T	G	P	M	F	A	G	K	T	A	E	L	I	R	R	L	H	R	L	E	Y	A	D	V	K	Y	L	V	F	K	P	K	I	D	T	.	.	.	.	.	.	.	.	.	R	S	I	R	N	I	Q	S	R	T	G	T	.	.	.	.	.	S	L	P	S	V	E	V	E	S	A	P	E	I	L	N	Y
Template Known Secondary structure							S	T	T	S																T	T												G	.	.	.	.	.	.	.	.	.	G	G		S	S								.	.	.	.	.	S	S						S	S	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.										.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		104	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		L	D	.	.	A	F	Q	G	E	F	S	L	L	I	V	D	E	C	H	R	I	G	D	D	E	E	S	Q	Y	Q	Q	I	L	T	H	L	T	K	V	N	P	H	L	R	L	L	G	L	T	A	T	P	F	R	L	G	K	G	W	I	Y	Q	F	H
Query Conservation				.	.
Alig confidence				.	.																				.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		I	M	S	N	S	F	N	D	E	T	K	V	I	G	I	D	E	V	Q	F	F	D	D	.	.	.	.	R	I	C	E	V	A	N	I	L	A	E	N	G	F	V	V	I	I	S	G	L	D	K	N	F	K	G	E	P	F	G	P	I	A	K	L	F
Template Known Secondary structure				S	T	T	S		T	T								S	G	G	G	S		T	.	.	.	.												T	T									S	B		T	T	S	S	B		T	T
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions