Job Description P33919 Confidence 94.84% Date Thu Jan 5 11:52:45 GMT 2012 Rank 301 Aligned Residues 129 % Identity 13% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		E	A	V	D	A	T	L	N	H	F	R	R	H	K	T	P	A	V	I	V	L	P	T	G	A	G	K	S	L	V	I	A	E	L	A	R	L	A	.	.	.	R	G	R	V	L	V	L	A	H	V	K	E	L	V	A	Q	N	H	A	K	Y	Q	A	L	G	L	E	A	D	I	F	A	A	G	L	K	R	K	E
Query Conservation																																								.	.	.
Alig confidence																																								.	.	.														.
Template Conservation																																																								.
Template Sequence		V	R	L	D	E	M	C	G	G	G	F	F	K	D	S	I	I	L	A	T	G	A	T	G	T	G	K	T	L	L	V	S	R	F	V	E	N	A	C	A	N	K	E	R	A	I	L	F	A	Y	E	E	S	R	.	A	Q	L	L	R	N	A	Y	S	W	G	M	D	F	E	E	M	E	R	Q	N	L	L	K	I
Template Known Secondary structure								T	T	S	S			S	S									T	T	S	S														T	T	T								S	S	S			.									T	T	S									T	T	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																								.	.															.
Query SS confidence																								.	.															.
Query Sequence		S	H	G	K	V	V	F	G	S	V	Q	S	V	A	R	N	L	D	A	F	Q	G	.	.	E	F	S	L	L	I	V	D	E	C	H	R	I	G	.	D	D	E	E	S	Q	Y	Q	Q	I	L	T	H	L	T	K	V
Query Conservation																								.	.															.
Alig confidence																								.	.															.
Template Conservation
Template Sequence		V	C	A	Y	P	E	S	A	G	L	E	D	H	L	Q	I	I	K	S	E	I	N	D	F	K	P	A	R	I	A	I	D	S	L	S	A	L	A	R	G	V	S	N	N	A	F	R	Q	F	V	I	G	V	T	G	Y
Template Known Secondary structure						G	G	G	S															T	T			S											T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions