Job Description P0AF80 Confidence 2.33% Date Thu Jan 5 11:25:32 GMT 2012 Rank 12 Aligned Residues 101 % Identity 8% Template c3dh4A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	D	S	L	L	A	F	S	A	Y	F	F	I	G	V	A	M	V	I	I	F	L	F	I	Y	S	K	I	T	P	H	N	E	W	Q	L	I	K	N	N	N	T	A	A	S	L	A	F	S	G	T	L	L	G	Y	V	I	P	L	S	S	A	A	I	N	A	V	S	I	P	D	Y	F	A	W	G	G	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	A	A	L	A	A	A	I	V	S	S	L	A	S	M	L	N	S	T	A	T	I	F	T	M	D	I	Y	K	E	Y	I	S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	C	L	I	A	P	M	L	G	G	I	G	Q	A	F	Q	Y	I	Q	E	Y	T	G	L
Template Known Secondary structure																													T							S		S		S	S																					G	G	G	G	G	G		S											T	T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	I	Q	L	L	V	F	A	G	V	R	L	Y	M	P	A	L	S	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	P	G	I	L	A	V	F	L	L	G	L	F	W	K	K	T	T	S	K
Template Known Secondary structure		T															T	T
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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