Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF80
Confidence1.09%DateThu Jan 5 11:25:32 GMT 2012
Rank45Aligned Residues35
% Identity11%Templatec2oarA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: mechanosensitive channel of large conductance (mscl)
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40..... ....50.........60.........
Predicted Secondary structure 


...

Query SS confidence 










. . .























Query Sequence  NEWQLIKNNNT. . . AASLAFSGTLLGYVIPLSSAAINA
Query Conservation      

  

 ...



 
 
  

  


 


  
Alig confidence 










...























Template Conservation   

 

 













 

  

 


 




Template Sequence  GFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITP
Template Known Secondary structure  S
Template Predicted Secondary structure 

Template SS confidence 





































   4.....10.........20.........30.........40.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions